CDS

Accession Number TCMCG017C24513
gbkey CDS
Protein Id OMO73680.1
Location join(45740..46077,46372..46447,46531..46620,46704..46748,46871..46972,47187..47288,47536..47626,47850..47899,48440..48550,48648..48787,48874..48913,49322..49384,49480..49670,49868..50354)
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_26937

Protein

Length 641aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019401.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_26937

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K15691        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0002039        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031297        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031571        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044783        [VIEW IN EMBL-EBI]
GO:0044819        [VIEW IN EMBL-EBI]
GO:0045005        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0097371        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901976        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1902807        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:2000001        [VIEW IN EMBL-EBI]
GO:2000045        [VIEW IN EMBL-EBI]
GO:2000134        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAAACCCTAACCCCAACGACTACATTGTACTCGAATTAGAATCAGATGAAGAAACCGAACCAGGATCCGAAGAAGAAGAAGAGGAAGAAACCGAAGAAGACGAAGAAGATTCCGAAGAAGAACAAGAGCAAGAACAGGAAGAGCCGGTGACAGAGTCCACTAGGGGTTTTTCAAGCAAAGAAGGAGAGAAGGGAGGAGAAGGGGGAATTTGTTCGAGTGCGGGAGAGACTGGCGAAAGCTCTCAGGGTAACGAGTGGAATCGCGGTGACATCGATGGCTTGTTTTGCCCCATCTGTATGGAAGCTTGGGCTACATCCGGTGACCATCATGTCTGTTGTCTTCCTTGTGGGCACATATTTGGTTTTTCCTGCATTCATAAATGGTTACAACAACGTGGATCTGCAAGAAAGTGTCCTCAATGTAACAGGAAATGCACATTAAAAGATGTACGGAAACTGTTTGCATCAAGGGTTGTTGCAATTGATGGAGAATCACAAAAGAGAATTCGATCTCTTGAAGCTAAGTGCATTGCTCTGGAAAAGAAGAATTCTGTTTTGAGTAAGAAAGAAGGCGAATGGAGAAAGAGAGAAGCTGAAGGGAAAAATAGAGAAGCTGGATTAAAACAAGAAATTCACCAATGTAAAGAGCACTTTTTTCTCTGCTTCTTGTTTTGTGGTAGTGGTCATTTCTTGAAGTTTGAGCTTGCCTCGAGTCATTGCGCGGTCCAACTCTCAGATATGACTGGTGCTAAAATAAATTATTTGGAGCAGTTAGTAGAGGTGTGGAAGAGGACAGCCAGAGGTGCACCTTCAATGGGGGGTAATCAAATACAATCTCGAGGGCACAACCAAGATGCAAATTTAAATGGGCAAGGGCCTTTCATGCTGCAGACAGAAGTGAGGGTGGATGGTGCACGGCTGTTCGATTTAGATGCTTCCAGAAAAATTTTATTAATGACAAGAAGATTGCAAGGGTTGGGTGGAGCTCATGTTCTTACCAAAATGAGCTTGGTAGCTCCACATGAGAAGGAGAATATTTCATTGCCTACTGGTGCAAAAGCGATAAGGGATCTCCACATTTGTCCTTCAGATGGTAGCTTGGCTCTTTTAGCTTCCTTAGGAAAGAAATTATTGGTTCTCAGCACAGAAAGCAACCATGTTGTTCTTGCCTATGATCTACCGGCTGCCGGTTGGTCATGTTCGTGGGATCTCAACAATTCTCATCATGTATATGCTGGATTGCAGAATGGCTCAGTTTTGGTGTTTGATATCCGCCAAACTGCCAGGCCTATGGAATCTGTGAATGGGCTGACAAGTAACCCAGTTCATTCCATTCACGCTTTAAGTAATTCAACCATTTCTTCTGGTGCTACAGCAATTCTATCAGCATCTTCAGTAGGCATTTGTCAGTGGAGCTTTGGTGGTTCTGAAGAAAGGCCATTTTTGGTTTCGGAGGCTGGCAATCAAGGAGTGTGTATTTCTCTTTCTTATTGTCCTAGCAGCGACGGCATTGTTGCTTCATATCGTCCAAGAATTGACTTTTCTAATGAAATGGCATCTTCTCAACCTCTAGCAACTCCTGTTATTGGACAAGGGGTACAGGGTTCCCATGTTCATTTGCAGAGAGTTGGACGAAACTGTTATAAGAAGCTTGGTGTTACATATGCCAATGTCAATGATGTACGGTTGCCAAGATCTACTATCATGAACTTAAAGAATCATGGGTGTTTATTTGCATCAGGGGATGAACTTACTGGTGACTTGGTCTTGCGAGAGTTGCCATCTTTTTCCACCGTTCAGCGTCTTAAAACACCAAATCATCCTATTCATGATGTGAAGTATGCAGATGGCTTCGACGGAGGTTTACTAGGTTGTTTAAGTGAGGATATATTTCAGCTGTTCAGCAATCCTGATCGATTATAG
Protein:  
MANPNPNDYIVLELESDEETEPGSEEEEEEETEEDEEDSEEEQEQEQEEPVTESTRGFSSKEGEKGGEGGICSSAGETGESSQGNEWNRGDIDGLFCPICMEAWATSGDHHVCCLPCGHIFGFSCIHKWLQQRGSARKCPQCNRKCTLKDVRKLFASRVVAIDGESQKRIRSLEAKCIALEKKNSVLSKKEGEWRKREAEGKNREAGLKQEIHQCKEHFFLCFLFCGSGHFLKFELASSHCAVQLSDMTGAKINYLEQLVEVWKRTARGAPSMGGNQIQSRGHNQDANLNGQGPFMLQTEVRVDGARLFDLDASRKILLMTRRLQGLGGAHVLTKMSLVAPHEKENISLPTGAKAIRDLHICPSDGSLALLASLGKKLLVLSTESNHVVLAYDLPAAGWSCSWDLNNSHHVYAGLQNGSVLVFDIRQTARPMESVNGLTSNPVHSIHALSNSTISSGATAILSASSVGICQWSFGGSEERPFLVSEAGNQGVCISLSYCPSSDGIVASYRPRIDFSNEMASSQPLATPVIGQGVQGSHVHLQRVGRNCYKKLGVTYANVNDVRLPRSTIMNLKNHGCLFASGDELTGDLVLRELPSFSTVQRLKTPNHPIHDVKYADGFDGGLLGCLSEDIFQLFSNPDRL